Stanley Lab

*Manning, C.C., R. H. R. Stanley, D. P. Nicholson, B. Loose, A. Lovely, P. Schlosser, and B. G. Hatcher. “Changes in gross primary production, net community production, and air-water gas exchange during seasonal ice melt in the Bras d'Or Lake, a Canadian estuary” submitted to Biogeosciences.

 

Ji, B.Y., Z. O. Sandwith, W. J. Williams, O. Diaconescu, R. Ji, Y. Li, E. Van Scoy, M. Yamamoto-Kawai, S. Zimmermann, R. H. R. Stanley. “Variations in Rates of Biological Production in the Beaufort Gyre as the Arctic Changes: Rates from 2011 to 2016” in press in Journal of Geophysical Research: Oceans.

 

Vonk, J.E., Drenzek, N.J., Hughen K.A., Stanley, R.H.R., McIntyre, C., Montlucon, D.B., Giosan, L., Southon, J.R., Santos, G. M., Druffel, E. R., Andersson A A., Skold, M., Eglinton, T.I. “Temporal deconvolution of vascular plant signatures exported from terrestrial watersheds.” Geochimica et Cosmochimica Acta 244. 502–521. (2019).

 

Stanley, R. H. R., Ocean thermometer from the past. Nature 553, 30-31 (2018).

 

*Howard, E. M., I. Forbrich, A. E. Giblin, D. E. Lott III, K. L. Cahill. R. H. R. Stanley, “Using Noble Gases to Compare Parameterizations of Air-Water Gas Exchange and to Constrain  Oxygen Losses by Ebullition in a Shallow Aquatic Environment.” Journal of Geophysical Research: Biogeosciences.  123, 2711–2726. doi: 10.1029/2018JG004441 (2018).

 

Nicholson, D. P., Stanley, R.H.R., and Doney, S.C. “A Phytoplankton Model for the Allocation of Gross Photosynthetic Energy Including the Trade-offs of Diazotrophy”, Journal of Geophysical Research Biogeosciences, (2018).

 

Stanley, R. H. R., D. J. McGillicuddy, Jr., Z. O. Sandwith, and H. Pleskow.  “Submesoscale Hotspots of Productivity and Respiration: Insights from High-Resolution Oxygen and Fluorescence Sections”, Deep Sea Research I, 130, 1-11. (2017).

 

*Howard, E. M., C.A.Durkin, G.M.M. Hennon, F. Ribalet, and R.H.R. Stanley. “Biological production, export efficiency, and phytoplankton communities across 8000 km of the South Atlantic: Basin scale similarity with mesoscale variability”. Global Biogeochemical Cycles. 31, 1066-1088, doi:10.1002/2016GB005488. (2017)

 

*Manning, C. C., E. M. *Howard, D. P. Nicholson, B.Y. Ji, Z. O. Sandwith, and R. H. R. Stanley, “Revising estimates of aquatic gross oxygen production by the triple oxygen isotope method to incorporate the local isotopic composition of water.” Geophysical Research Letters. 2017. 44. doi: 10.1002/2017GL074375 (2017).

 

Spivak, A. C., K. Gosselin, E. M. Howard, G. Mariotti, I. Forbrich, R. H. R. Stanley, S. P. Sylva. “Shallow ponds are heterogeneous habitats that impact salt marsh ecosystem functioning”  Journal of Geophysical Research: Biogeosciences. 122, 1371–1384, doi:10.1002/2017JG003780. (2017).

 

Haskell, W. Z., M. G. Prokopenko, D. E. Hammond, Z. O. Sandwith, and R. H. R. Stanley. “Annual Cyclicity in Export Efficiency in the Inner Southern California Bight”. Global Biogeochemical Cycles.  31, doi:10.1002/2016GB005561. (2017).

 

Manning, C. C., R. H. R. Stanley, D. P. Nicholson, J. M. Smith, J. Timothy Pennington, M. R. Fewings, M. E. Squibb, and F. P. Chavez. “Impact of recently upwelled water on productivity investigated using in situ and incubation-based methods in Monterey Bay” Journal of Geophysical Research: Ocean. 122, 1901–1926, doi:10.1002/2016JC012306.  (2017).

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Haskell, W. Z., M. G. Prokopenko, R. H. R. Stanley, W. Berelson, L. Aluqihare, J. C. Fleming, and J. J. Baronas. “An Organic Carbon Budget for Coastal Southern California Determined By Estimates of Vertical Nutrient Flux, Net Community Production and Export” Deep-Sea Research Part I.  116: 49-76 (2016).

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Kearns, P. K., J. H. Angell, E. M. Howard*, L. A. Deegan, R. H. R. Stanley, and J. L. Bowen. “Nutrient enrichment induces high rates of dormancy and decreases diversity of active  bacterial taxa.” Nature Communications. 7,  doi: 10.1038/ncomms12881 (2016).

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Haskell, W. Z., M. G. Prokopenko, and R. H. R., Stanley, “Estimates of vertical turbulent mixing used to determine a vertical gradient in net and gross oxygen production in the oligotrophic South Pacific Gyre”. Geophysical Research Letters. 43, 7590–7599, doi:10.1002/2016GL069523. (2016).
 

Manning*, C, C., R. H. R. Stanley, and D. E. Lott, III. “Continuous  measurement of dissolved Ne, Ar, Kr and Xe ratios with a field-deployable gas equilibration mass spectrometer.” Analytical Chemistry. 88:3040-3048. DOI: 10.1021/acs.analchem.5b03102. (2016).

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Manning*, C.C., R. H. R. Stanley, D. P. Nicholson*, M. E. Squibb,  Quantifying air-sea gas exchange using noble gases in a coastal upwelling zone, in: Asher, W.E., Jessup, A. (Eds.), Proceedings of the 2015 Gas Transfer Water Surfaces Conference. (2016)

 

Siegel, D., K. Buesseler, M. Behrenfeld, C. Benitez-Nelson, E. Boss, M. Brzezinski, A. Burd, C. Carlson, E. D’Asaro, S. Doney, M.J. Perry, R. Stanley, D. Steinberg . “Prediction of the Export and Fate of Global Ocean Net Primary  Production: The EXPORTS Science Plan”. Frontiers in Marine Science.3:22. doi: 10.3389/fmars.2016.00022(2016).

 

Buchwald, C., A. E. Santoro, R. H. R. Stanley, and K. L. Casciotti, “Nitrogen cycling in the secondary nitrite maximum of the Eastern Tropical North Pacific off Costa Rica”. Global Biogeochemical Cycles. 29: 2061-2081. doi: 10.1002/2015GB005187 (2015).

 

Estapa M. L., D. A. Siegel, K. O. Buesseler, R. H. R. Stanley, M. W. Lomas, and N. B. Nelson. “Decoupling of net community production and export production at submesoscale fronts in the Sargasso Sea” Global Biogeochemical Cycles. 29:1266-1282. doi:10.1002/2014GB004913. (2015).

 

Stanley, R. H. R. W. J. Jenkins, S. C. Doney, and D. E. Lott, III “The 3He Flux Gauge in the Sargasso Sea: a Determination of Physical Nutrient Fluxes to the Euphotic Zone at the Bermuda Atlantic Time Series Site.” Biogeosciences. 12, 5199-5210. doi: 10.5194/bg-12-5199-2015 (2015).

 

Stanley, R. H. R., Z. O. Sandwith, and W. J. Williams. “Rates of summertime biological productivity in the Beaufort Gyre: A comparison between record-low and more typical ice conditions” Journal of Marine Systems. 147,  29-44. (2015).

 

Goldman, J., S. Kranz, J. Young, P. Tortell, R. H. R. Stanley, M. L.  Bender, F. Morel.  “Gross and net production during the spring bloom along the Western Antarctic Peninsula”  New Phytologist, 205. 182-191. (2015).

 

Nicholson*, D. P., Stanley, R. H. R., and Doney, S. C. “The  triple oxygen isotope tracer of primary productivity in a dynamic ocean.”  Global Biogeochemical Cycles. 28, 538–552, doi:10.1002/2013GB004704. (2014).

 

Stanley, R. H. R., and E. Howard*, “Quantifying rates of benthic microalgal photosynthesis using the triple-isotope composition of dissolved oxygen.” Limnology and Oceanography Methods. 11 360-373. (2013).

 

Stanley, R.H.R. and W. J. Jenkins “Noble gases in seawater as tracers for physical and biogeochemical ocean processes” in The Noble Gases as Geochemical Tracers, Ed. P. Burnard. Springer Verlarg. Berlin. pp.55-80.  (2013)

 

Stanley, R.H.R., S.C. Doney, W. J. Jenkins, and D.E. Lott III, “Apparent oxygen utilization rates calculated from tritium and helium-3 profiles at the Bermuda Atlantic Time-series Study site.” Biogeosciences. doi:10.5194/bg-9-1969-2012:9977-10015. (2012)

 

Nicholson*, D. P., Stanley, R. H. R., Barkan, E., Karl, D. M., Luz, B., Quay, P.D.,  and Doney, S.C.

“Evaluating triple oxygen isotope estimates of gross primary production at the Hawaii Ocean Time-series and Bermuda Atlantic Time-series Study sites.” J Geophys Res-Oceans 117:C05012 doi:10.1029/2010JC006856. (2012).

 

Stanley, R.H.R., J.B. Kirkpatrick,  N. Cassar, B.A. Barnett, and M.L. Bender. Net community production and gross production rates in the Western Equatorial Pacific. Global Biogeochemical Cycles. doi:10.1029/h2009GB003651. (2010).

 

Stanley, R.H.R., W. J. Jenkins, S. C. Doney, and D. E Lott III. “Noble Gas Constraints on Air-Sea Gas Exchange and Bubble Fluxes.” Journal of Geophysical Research - Oceans, 114 doi:10.1029/2009JC005396. (2009).

 

Stanley, R.H.R., B. Baschek, D.E. Lott III, and W.J. Jenkins. “A new method for measuring five noble gases using stainless steel cryogenic trapping and quadrupole mass spectrometry.” doi:10.1029/2009GC002429. (2009).

 

Stanley, R.H.R., W.J. Jenkins and S.C. Doney. “Quantifying seasonal air-sea gas exchange processes using noble gas time-series: A design experiment.” Journal of Marine Research. 64: 267-295. (2006).

 

Stark, S., P.J. Statham, R.H.R. Stanley, and W.J. Jenkins. “Using tree ring cellulose as a tool to estimate past tritium inputs to the ocean.” Earth Planet. Sci. Lett. 237: 341-353. (2005).

 

Stanley, R.H.R., K.O. Buesseler, S.J. Manganini, D.K. Steinberg and J.R. Valdes.  “A comparison of major and minor elemental fluxes collected in neutrally buoyant and surface-tethered sediment traps.” Deep Sea Research I. 51: 1387-1395. (2004).

 

Brabander, D.J., N. Keon, N., R.H.R. Stanley, and H.F. Hemond.  “Intra-ring variability of Cr, As, Cd, and Pb in red oak revealed by secondary ion mass spectrometry: Implications for environmental biomonitoring.” Proceedings of the National Academy of Sciences of the United States of America, 96(25): 14635-14640. (1999) .

 

Stanley, R.H.R., N.V. Dokholyan, S.V. Buldyrev, S. Havlin and H.E. Stanley. “Clustering of identical oligomers in coding and noncoding DNA sequences.” Journal of Biomolecular Structure & Dynamics, 17(1): 79-87. (1999).

 

Buldyrev, S.V. N.V. Dokholyan, S. Havlin, H.E. Stanley, and R.H.R. Stanley. “Expansion of tandem repeats and oligomer clustering in coding and noncoding DNA sequences.” Physica A-Statistical Mechanics and Its Applications, 273(1-2): 19-32. (1999).